Research
Metagenomic Classification
Wide Distribution
Computational Biology
Microbial Pathogens
One Health
Antimicrobial Resistance
Oxford Nanopore Technologies
Ralstonia Solanacearum
Ice Nucleation
Pathogen Detection
Data Sharing
Cool Virulence
Whole Genome
Case Presentation
Kidney Transplant
Literature Review
Meta Analysis
Population Genomics
Sensitive Detection
Comprehensive Resource
Disease Alleles
Experimental Evidence
Multiple Hosts
List of Publications (35)
In 2024
35
A Survey of Xylella fastidiosa in the U.S. State of Virginia Reveals Wide Distribution of Both Subspecies fastidiosa and multiplex in Grapevine. S Abdelrazek, E Bush, C Oliver, H Liu, P Sharma, MA Johnson, ... Phytopathology 114 (1), 35-46, 2024.
Found on Publication Page
34
Genotypic and Phenotypic Analyses Show Ralstonia solanacearum Cool Virulence is a Quantitative Trait Not Restricted to'Race 3 biovar 2'. RJ Dewberry, P Sharma, JL Prom, NA Kinscherf, T Lowe-Power, ... bioRxiv, 2024.06. 13.598915, 2024.
Found on Publication Page
In 2023
33
The Ralstonia Research Community Rejects the Proposal to Classify Phylotype I Ralstonia into the New Species Ralstonia nicotianae. T Lowe-Power, P Sharma, P Alfenas-Zerbini, B A lvarez, M Arif, C Baroukh, ... PhytoFrontiersTM 3 (4), 761-766, 2023.
Found on Publication Page
32
Genomic delineation and description of species and within-species lineages in the genus Pantoea. KC Crosby, M Rojas, P Sharma, MA Johnson, R Mazloom, BH Kvitko, ... Frontiers in Microbiology 14, 1254999, 2023.
Found on Publication Page
31
Adapting genome similarity-based taxonomy for metagenomic classification to achieve strain-level pathogen detection. P Sharma Bacterial Plant Pathogen Identification using Genomics and Metagenomics, 124, 2023.
Found on Publication Page
In 2022
30
Population genomics of the Ralstonia solanacearum species complex and plant pathogen detection and identification using long-read metagenomics. P Sharma, MA Johnson, R Mazloom, C Allen, LS Heath, TM Lowe-Power, ... Computational Tools for Improved Detection, Identification, and ..., 2022.
Found on Publication Page
29
Characterization of the Xylella fastidiosa population in Virginia using metagenomics. S Abdelrazek, MA Johnson, P Sharma, H Liu, EA Bush, M Nita, ... PHYTOPATHOLOGY 112 (11), 80-81, 2022.
Found on Publication Page
28
A near-clonal pandemic lineage of Ralstonia solanacearum is uniquely adapted to cause potato brown rot at cool temperatures. RJ Dewberry, P Sharma, BA Vinatzer, C Allen PHYTOPATHOLOGY 112 (11), 75-75, 2022.
Found on Publication Page
27
Rapid and precise metagenomics classification for pathogen detection using an exclusively genome-similarity-based approach. P Sharma, R Mazloom, L Heath, BA Vinatzer PHYTOPATHOLOGY 112 (8), 17-17, 2022.
Found on Publication Page
26
genomeRxiv: a microbial whole-genome database and diagnostic marker design resource for classification, identification, and data sharing. L Pritchard, P Sharma, R Mazloom, T Pierce, L Irber, B Harrington, ... Access Microbiology 4 (5), po0368, 2022.
Found on Publication Page
25
Investigating plant disease outbreaks with long-read metagenomics: sensitive detection and highly resolved phylogenetic reconstruction applied to Xylella fastidiosa. MA Johnson, H Liu, E Bush, P Sharma, S Yang, R Mazloom, LS Heath, ... Microbial genomics 8 (5), 000822, 2022.
Found on Publication Page
24
Meta-analysis of the Ralstonia solanacearum species complex (RSSC) based on comparative evolutionary genomics and reverse ecology. P Sharma, MA Johnson, R Mazloom, C Allen, LS Heath, TM Lowe-Power, ... Microbial Genomics 8 (3), 000791, 2022.
Found on Publication Page
23
Correction to: Ice nucleation in a Gram-positive bacterium isolated from precipitation depends on a polyketide synthase and non-ribosomal peptide synthetase. KC Failor, H Liu, MEM Llontop, S LeBlanc, N Eckshtain-Levi, P Sharma, ... The ISME Journal 16 (3), 901-901, 2022.
Found on Publication Page
22
Ice nucleation in a Gram-positive bacterium isolated from precipitation depends on a polyketide synthase and non-ribosomal peptide synthetase. KC Failor, H Liu, MEM Llontop, S LeBlanc, N Eckshtain-Levi, P Sharma, ... The ISME Journal 16 (3), 890-897, 2022.
Found on Publication Page
In 2021
21
Experimental evidence pointing to rain as a reservoir of tomato phyllosphere microbiota. ME Mechan Llontop, L Tian, P Sharma, L Heflin, V Bernal-Galeano, ... Phytobiomes Journal 5 (4), 382-399, 2021.
Found on Publication Page
20
Adaptation of the genus Pantoea (Gammaproteobacteria: Enterobacteriales: Erwiniaceae) to multiple hosts and environments. K Crosby, P Sharma, M Aguilera, BA Vinatzer PHYTOPATHOLOGY 111 (10), 93-93, 2021.
Found on Publication Page
19
Lysinibacillus: A poorly characterized genus with potential for agricultural and environmental applications. M Rojas, H Liu, P Sharma, M Aguilera, S Yang, A Reed, C Deromedi, ... PHYTOPATHOLOGY 111 (10), 111-112, 2021.
Found on Publication Page
18
Metagenomics and long-read nanopore sequencing for rapid and culture-free plant pathogen surveillance. M Aguilera, P Sharma, S Yang, H Liu, R Mazloom, L Heath, S Li, ... PHYTOPATHOLOGY 111 (10), 160-160, 2021.
Found on Publication Page
17
A comparative genomics investigation into cool-virulence in Ralstonia solanacearum to improve its phytosanitary regulation. P Sharma, M Aguilera, R Mazloom, C Allen, GA Beattie, L Heath, ... PHYTOPATHOLOGY 111 (10), 38-38, 2021.
Found on Publication Page
16
The Ralstonia solanacearum cool virulence trait is not limited to the Race 3 biovar 2 subgroup. C Allen, J Prom, P Sharma, R Mazloom, BA Vinatzer, L Heath, GA Beattie, ... PHYTOPATHOLOGY 111 (10), 98-98, 2021.
Found on Publication Page
15
Genetic landscape of rare autoinflammatory disease variants in Qatar and Middle Eastern populations through the integration of whole-genome and exome datasets. P Sharma, A Jain, V Scaria Frontiers in Genetics 12, 631340, 2021.
Found on Publication Page
14
genomeRxiv: a microbial whole-genome database for classification, identification, and data sharing. L Pritchard, B Harrington, L Irber, R Mazloom, T Pierce, P Sharma, ... Microbiology Society Annual Conference 2021, 2021.
Found on Publication Page
13
DALIA-a comprehensive resource of Disease Alleles in Arab population. A Vatsyayan, P Sharma, S Gupta, S Sandhu, SL Venu, V Sharma, ... Plos one 16 (1), e0244567, 2021.
Found on Publication Page
In 2020
12
Genome-based circumscription of cool-virulent Ralstonia solanacearum strains in an attempt to improve their regulation. P Sharma Plant Health 2020 Online, 2020.
Found on Publication Page
11
Culture-independent plant pathogen identification from metagenomic DNA using The Oxford Nanopore Technologies (ONT) MinION (TM). M Aguilera, P Sharma, ME Llontop, S Yang, S Li, BA Vinatzer PHYTOPATHOLOGY 110 (7), 36-37, 2020.
Found on Publication Page
10
Genome resource: Ralstonia solanacearum phylotype II sequevar 1 (race 3 biovar 2) strain from the 2020 US geranium introduction. CA Veronica Roman-Reyna, Alicia Truchon, Parul Sharma, Francesca Peduto Hand ... Plant Disease, 2020.
Found on Publication Page
9
Strain-level identification of bacterial tomato pathogens directly from metagenomic sequences. ME Mechan Llontop, P Sharma, M Aguilera Flores, S Yang, J Pollok, ... Phytopathology 110 (4), 768-779, 2020.
Found on Publication Page
8
Strain-level identification of tomato pathogens from metagenomic sequences obtained with the ONT MinION. P Sharma, ME Mechan Llontop, M Aguilera Flores, S Li, BA Vinatzer Virginia Tech, 2020.
Found on Publication Page
In 2019
7
Using the Oxford Nanopore Technologies MinION sequencer for rapid plant pathogen diagnosis. ME Llontop, P Sharma, S Li, BA Vinatzer PHYTOPATHOLOGY 109 (9), 2019.
Found on Publication Page
6
Cyclosporine A and amlodipine induced gingival overgrowth in a kidney transplant recipient: Case presentation with literature review. T Nanda, B Singh, P Sharma, KS Arora BMJ Case Reports CP 12 (5), e229587, 2019.
Found on Publication Page
In 2016
5
Landscape of warfarin and clopidogrel pharmacogenetic variants in Qatari population from whole exome datasets. A Sivadas, P Sharma, V Scaria Pharmacogenomics 17 (17), 1891-1901, 2016.
Found on Publication Page
4
Escherichia coli biofilm: development and therapeutic strategies. G Sharma, S Sharma, P Sharma, D Chandola, S Dang, S Gupta, ... Journal of applied microbiology 121 (2), 309-319, 2016.
Found on Publication Page
In 2014
3
Microbial removal of arsenic: Mechanisms and applications. S Dangayach, P Sharma, P Singhai, N Gupta As. J. Multidis. Stud 2, 159-170, 2014.
Found on Publication Page
Unspecified
2
Long-read metagenomics to investigate plant disease outbreaks beyond plant pathogen detection and identification. MA Johnson, H Liu, E Bush, P Sharma, S Yang, R Mazloom, LS Heath, ... 2022 Fall Central Sectional Meeting, 0.
Found on Publication Page
