Reinhard Beichel

Profile Picture of Reinhard Beichel
Title
Associate Professor
Department
Electrical and Computer Engineering
Institution
University of Iowa

Education

  • Ph.D., Telematics (Computer Science), Graz University of Technology, 2005
  • M.S., Telematics (Computer Science), Graz University of Technology, 1999

Research Interests

Medical Image Analysis   Robust Modeling, Robust Model   Pet Image Analysis  

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Biography

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Homepages

Contact Information

  (319) 335-4597

Research
Not mentioned yet. (?)
List of Publications (105)
In 2016
105

Airway tree reconstruction in expiration chest CT scans facilitated by information transfer from corresponding inspiration scans. C Bauer, M Eberlein, RR Beichel Medical physics 43 (3), 1312-1323, 2016.

Found on Publication Page
104

DICOM for quantitative imaging biomarker development: a standards based approach to sharing clinical data and structured PET/CT analysis results in head and neck cancer research. A Fedorov, D Clunie, E Ulrich, C Bauer, A Wahle, B Brown, M Onken, ... PeerJ 4, e2057, 2016.

Found on Publication Page
103

Semiautomated segmentation of head and neck cancers in 18F-FDG PET scans: A just-enough-interaction approach. RR Beichel, M Van Tol, EJ Ulrich, C Bauer, T Chang, KA Plichta, BJ Smith, ... Medical physics 43 (6), 2948-2964, 2016.

Found on Publication Page
102

An approach for reducing the error rate in automated lung segmentation. G Gill, RR Beichel Computers in Biology and Medicine 76, 143-153, 2016.

Found on Publication Page
101

Clinical validation of a real-time applicator position monitoring system for gynecologic intracavitary brachytherapy. W Bou-Zeid, C Bauer, Y Kim, RR Beichel, W Sun, T Waldron, J Xia Biomedical Physics & Engineering Express 2 (4), 045008, 2016.

Found on Publication Page
100

Impact of Contouring Accuracy on Expected Tumor Control Probability for Head and Neck Cancer: Semiautomated Segmentation Versus Manual Contouring. Y Kim, KA Patwardhan, RR Beichel, BJ Smith, EJ Ulrich, C Mart, T Chang, ... International Journal of Radiation Oncology Biology Physics 96 (2), E545, 2016.

Found on Publication Page
In 2015
99

Segmentation of Diseased Livers: A 3D Refinement Approach. R Beichel, C Bauer, A Bornik, E Sorantin, H Bischof Handbook of Biomedical Imaging, 403-412, 2015.

Found on Publication Page
98

Lung segmentation in 4D CT volumes based on robust active shape model matching. G Gill, RR Beichel Journal of Biomedical Imaging 2015, 10, 2015.

Found on Publication Page
97

Graph-based airway tree reconstruction from chest CT scans: evaluation of different features on five cohorts. C Bauer, M Eberlein, RR Beichel IEEE transactions on medical imaging 34 (5), 1063-1076, 2015.

Found on Publication Page
96

Chest Wall Strapping Induces Small Airway Dilation And Enhances Expiratory Airflow. C Bauer, H Winnike, J Zabner, RR Beichel, M Eberlein, HZ Taher A28. FLOW-VOLUME UNDERWORLD: COMING TO THE MILE-HIGH CITY, A1206-A1206, 2015.

Found on Publication Page
95

RAPS: A Real Time Portable Tandem and Ovoid Applicator Monitoring System for Gynecologic Intracavitary Brachytherapy. C Bauer, R Beichel, Y Kim, W Bou-zeid, T Waldron, W Sun, SK Bhatia, ... International Journal of Radiation Oncology Biology Physics 93 (3), S164, 2015.

Found on Publication Page
94

A Novel Approach to Deliver Non-Coplanar Intensity Modulated Radiation Therapy Using Simple Orthogonal Collimators. D Nguyen, D Ruan, D O'Connor, D Low, K Sheng International Journal of Radiation Oncology Biology Physics 93 (3), S164-S165, 2015.

Found on Publication Page
In 2014
93

Airway tree segmentation in serial block-face cryomicrotome images of rat lungs. C Bauer, MA Krueger, WJ Lamm, BJ Smith, RW Glenny, RR Beichel IEEE Transactions on Biomedical Engineering 61 (1), 119-130, 2014.

Found on Publication Page
92

Robust initialization of active shape models for lung segmentation in CT scans: A feature-based atlas approach. G Gill, M Toews, RR Beichel Journal of Biomedical Imaging 2014, 13, 2014.

Found on Publication Page
91

A method for avoiding overlap of left and right lungs in shape model guided segmentation of lungs in CT volumes. G Gill, C Bauer, RR Beichel Medical physics 41 (10), 101908, 2014.

Found on Publication Page
90

Segmentation of lungs with interstitial lung disease in CT scans: a TV-L1 based texture analysis approach. G Gill, RR Beichel International Symposium on Visual Computing, 511-520, 2014.

Found on Publication Page
In 2013
89

Lung segmentation refinement based on optimal surface finding utilizing a hybrid desktop/virtual reality user interface. S Sun, M Sonka, RR Beichel Computerized Medical Imaging and Graphics 37 (1), 15-27, 2013.

Found on Publication Page
88

Efficient rendering of anatomical tree structures using geometry proxy. H Dou, C Bauer, C Wyman, RR Beichel 2013 IEEE 10th International Symposium on Biomedical Imaging, 206-209, 2013.

Found on Publication Page
87

Graph-based 4D lung segmentation in CT images with expert-guided computer-aided refinement. S Sun, M Sonka, RR Beichel 2013 IEEE 10th International Symposium on Biomedical Imaging, 1312-1315, 2013.

Found on Publication Page
86

Graph-based IVUS segmentation with efficient computer-aided refinement. S Sun, M Sonka, RR Beichel IEEE transactions on medical imaging 32 (8), 1536-1549, 2013.

Found on Publication Page
85

An automated initialization system for robust model-based segmentation of lungs in CT data. G Gill, M Toews, R Beichel Proceedings of the 5th International Workshop on Pulmonary Image Analysis ..., 2013.

Found on Publication Page
84

Heterogeneity and matching of ventilation and perfusion within anatomical lung units in rats. RW Glenny, C Bauer, J Hofmanninger, WJ Lamm, MA Krueger, ... Respiratory physiology & neurobiology 189 (3), 594-606, 2013.

Found on Publication Page
83

2013 Index IEEE Transactions on Medical Imaging Vol. 32. B Acha, E Adalsteinsson, A Adler, A Akhondi-Asl, M Alcaniz, ... IEEE Transactions on Medical Imaging 32 (12), 2365, 2013.

Found on Publication Page
82

Air trapping and airflow obstruction in newborn cystic fibrosis piglets. RJ Adam, AS Michalski, C Bauer, MH Abou Alaiwa, TJ Gross, ... American journal of respiratory and critical care medicine 188 (12), 1434-1441, 2013.

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In 2012
81

Automated 3-D segmentation of lungs with lung cancer in CT data using a novel robust active shape model approach. S Sun, C Bauer, R Beichel IEEE transactions on medical imaging 31 (2), 449-460, 2012.

Found on Publication Page
80

Liver segmentation in contrast enhanced CT data using graph cuts and interactive 3D segmentation refinement methods. R Beichel, A Bornik, C Bauer, E Sorantin Medical physics 39 (3), 1361-1373, 2012.

Found on Publication Page
79

Automated measurement of uptake in cerebellum, liver, and aortic arch in full-body FDG PET/CT scans. C Bauer, S Sun, W Sun, J Otis, A Wallace, BJ Smith, JJ Sunderland, ... Medical physics 39 (6), 3112-3123, 2012.

Found on Publication Page
78

Computer-aided lymph node segmentation in volumetric CT data. RR Beichel, Y Wang Medical physics 39 (9), 5419-5428, 2012.

Found on Publication Page
77

Comparative study with new accuracy metrics for target volume contouring in PET image guided radiation therapy. T Shepherd, M Teras, RR Beichel, R Boellaard, M Bruynooghe, V Dicken, ... IEEE transactions on medical imaging 31 (11), 2006-2024, 2012.

Found on Publication Page
76

Extraction of airways from CT (EXACT'09). P Lo, B Van Ginneken, JM Reinhardt, T Yavarna, PA De Jong, B Irving, ... IEEE Transactions on Medical Imaging 31 (11), 2093-2107, 2012.

Found on Publication Page
75

3D Slicer as an image computing platform for the Quantitative Imaging Network. A Fedorov, R Beichel, J Kalpathy-Cramer, J Finet, JC Fillion-Robin, ... Magnetic resonance imaging 30 (9), 1323-1341, 2012.

Found on Publication Page
74

Computer-aided analysis of airway trees in micro-CT scans of ex vivo porcine lung tissue. C Bauer, R Adam, DA Stoltz, RR Beichel Computerized Medical Imaging and Graphics 36 (8), 601-609, 2012.

Found on Publication Page
In 2011
73

Robust active shape model based lung segmentation in CT scans. S Sun, C Bauer, R Beichel Proc. 4th Int. Workshop Pulmonary Image Anal, 213-224, 2011.

Found on Publication Page
72

Fourth International Workshop on Pulmonary Image Analysis. R Beichel, A Kiraly, JM Kuhnigk, JR McClelland, K Mori, EM van Rikxoort, ... CreateSpace, 2011.

Found on Publication Page
71

Newborn cystic fibrosis pig tracheal lobe airway diameter and compliance measured with micro-CT. R Adam, C Bauer, R Beichel, DK Meyerholz, J Reinhardt, DA Stoltz PEDIATRIC PULMONOLOGY, 255-255, 2011.

Found on Publication Page
70

Automated normalization of metabolic activity in FDG PET: Alternative to SUV normalization. C Bauer, S Sun, J Sunderland, M Graham, M Sonka, J Buatti, R Beichel Journal of Nuclear Medicine 52 (supplement 1), 1768-1768, 2011.

Found on Publication Page
69

Avoiding mesh folding in 3D optimal surface segmentation. C Bauer, S Sun, R Beichel International Symposium on Visual Computing, 214-223, 2011.

Found on Publication Page
In 2010
68

Evaluating Lung Structure In The Cystic Fibrosis Ferret Model. R Adam, A Neiers, JT Fisher, JC Sieren, RR Beichel, JF Engelhardt, ... Am J Respir Crit Care Med 181, A3632, 2010.

Found on Publication Page
67

Evaluating Lung Structure In The Cystic Fibrosis Ferret Model. AR Smith, R Adam, A Neiers, JT Fisher, JC Sieren, RR Beichel, ... AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE 181, 2010.

Found on Publication Page
66

Graph-based segmentation of lymph nodes in CT data. Y Wang, R Beichel International Symposium on Visual Computing, 312-321, 2010.

Found on Publication Page
65

Segmentation of interwoven 3d tubular tree structures utilizing shape priors and graph cuts. C Bauer, T Pock, E Sorantin, H Bischof, R Beichel Medical image analysis 14 (2), 172-184, 2010.

Found on Publication Page
In 2009
64

Fast shape retrieval based on shape contexts. S Schlosser, R Beichel 2009 Proceedings of 6th International Symposium on Image and Signal ..., 2009.

Found on Publication Page
63

Comparison and evaluation of methods for liver segmentation from CT datasets. T Heimann, B Van Ginneken, MA Styner, Y Arzhaeva, V Aurich, C Bauer, ... IEEE transactions on medical imaging 28 (8), 1251-1265, 2009.

Found on Publication Page
62

Segmentation of airways based on gradient vector flow. C Bauer, H Bischof, R Beichel International workshop on pulmonary image analysis, Medical image computing ..., 2009.

Found on Publication Page
61

Airway tree reconstruction based on tube detection. C Bauer, T Pock, H Bischof, R Beichel Proceedings of the 2nd International Workshop on Pulmonary Image Analysis ..., 2009.

Found on Publication Page
60

Computed tomography assessment of response to therapy: tumor volume change measurement, truth data, and error. MF McNitt-Gray, LM Bidaut, SG Armato, CR Meyer, MA Gavrielides, ... Translational oncology 2 (4), 216-222, 2009.

Found on Publication Page
In 2008
59

Virtual Liver Surgery Planning. E Sorantin, G Werkgartner, R Beichel, A Bornik, B Reitinger, N Popovic, ... Image Processing in Radiology, 411-418, 2008.

Found on Publication Page
In 2007
58

Liver segmentation in CT data: A segmentation refinement approach. R Beichel12, C Bauer, A Bornik, E Sorantin, H Bischof Proceedings of" 3D Segmentation in The Clinic: A Grand Challenge, 235-245, 2007.

Found on Publication Page
57

A duality based algorithm for TV-L 1-optical-flow image registration. T Pock, M Urschler, C Zach, R Beichel, H Bischof International Conference on Medical Image Computing and Computer-Assisted ..., 2007.

Found on Publication Page
56

Virtual Liver Surgery Planning 29. E Sorantin, G Werkgartner, R Beichel, A Bornik, B Reitinger, N Popovic, ... Image Processing in Radiology: Current Applications, 411, 2007.

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In 2006
55

Liver surgery planning using virtual reality. R Beichel, D Schmalstieg IEEE Comput Graphics Appl 6, 36-47, 2006.

Found on Publication Page
54

Global Mesh Partitioning for Surgical Planning. P Frnstahl, B Reitinger, R Beichel, D Schmalstieg Central European Multimedia and Virtual Reality Conference, 2006.

Found on Publication Page
53

Computer vision approaches to medical image analysis. Revised papers. RR Beichel, M Sonka .

Found on Publication Page
52

A hybrid user interface for manipulation of volumetric medical data. A Bornik, R Beichel, E Kruijff, B Reitinger, D Schmalstieg 3D User Interfaces (3DUI'06), 29-36, 2006.

Found on Publication Page
51

Computer Vision Approaches to Medical Image Analysis: Second International ECCV Workshop, CVAMIA 2006, Graz, Austria, May 12, 2006, Revised Papers. Springer Science & Business Media, 2006.

Found on Publication Page
50

Spatial analysis tools for virtual reality-based surgical planning. B Reitinger, D Schmalstieg, A Bornik, R Beichel 3D User Interfaces (3DUI'06), 37-44, 2006.

Found on Publication Page
49

Integrated medical workflow for augmented reality applications. D Kalkofen, B Reitinger, P Risholm, A Bornik, R Beichel, D Schmalstieg, ... International Workshop on Augmented environments for Medical Imaging and ..., 2006.

Found on Publication Page
48

Interactive editing of segmented volumetric datasets in a hybrid 2D/3D virtual environment. A Bornik, R Beichel, D Schmalstieg Proceedings of the ACM symposium on Virtual reality software and technology ..., 2006.

Found on Publication Page
In 2005
47

Constructing smooth non-manifold meshes of multi-labeled volumetric datasets. B Reitinger, A Bornik, R Beichel UNION Agency, 2005.

Found on Publication Page
46

Virtual liver surgery planning: segmentation of CT data. RR Beichel na, 2005.

Found on Publication Page
45

Reconstruction and representation of tubular structures using simplex meshes. A Bornik, B Reitinger, R Beichel Vclav Skala-UNION Agency, 2005.

Found on Publication Page
44

Consistent mesh generation for non-binary medical datasets. B Reitinger, A Bornik, R Beichel Bildverarbeitung fr die Medizin 2005, 183-187, 2005.

Found on Publication Page
43

Simplex-mesh based surface reconstruction and representation of tubular structures. A Bornik, B Reitinger, R Beichel Bildverarbeitung fr die Medizin 2005, 143-147, 2005.

Found on Publication Page
42

A robust matching algorithm for active appearance models. R Beichel, H Bischof, G Langs, M Sonka Bildverarbeitung fr die Medizin 2005, 355-359, 2005.

Found on Publication Page
41

Multiscale medialness for robust segmentation of 3d tubular structures. T Pock, C Janko, R Beichel, H Bischof Proceedings of the Computer Vision Winter Workshop 2005, 2005.

Found on Publication Page
40

Bildanalyse und Computergrafik Visuelle Informationssysteme Sommersemester 2005 Aufgabenstellung zur bung. H Bischof, D Schmalstieg, R Beichel, M Grabner, A Bornik, F Fraundorfer .

Found on Publication Page
39

A novel robust tube detection filter for 3D centerline extraction. T Pock, R Beichel, H Bischof Scandinavian Conference on Image Analysis, 481-490, 2005.

Found on Publication Page
38

Consistent Mesh Generation for Non-binary Medical Datasets. BRA Bornik, R Beichel Bildverarbeitung fr die Medizin 2005: Algorithmen-Systeme-Anwendungen ..., 2005.

Found on Publication Page
37

Robust active appearance model matching. R Beichel, H Bischof, F Leberl, M Sonka Biennial International Conference on Information Processing in Medical ..., 2005.

Found on Publication Page
36

Robust active appearance models and their application to medical image analysis. R Beichel, H Bischof, F Leberl, M Sonka IEEE transactions on medical imaging 24 (9), 1151-1169, 2005.

Found on Publication Page
35

Spatial measurements for medical augmented reality. B Reitinger, P Werlberger, A Bornik, R Beichel, D Schmalstieg Fourth IEEE and ACM International Symposium on Mixed and Augmented Reality ..., 2005.

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In 2004
34

User-centric transfer function specification in augmented reality. B Reitinger, C Zach, A Bornik, R Beichel UNION Agency, 2004.

Found on Publication Page
33

Augmented reality based measurement tools for liver surgery planning. B Reitinger, A Bornik, R Beichel, G Werkgartner, E Sorantin Bildverarbeitung fr die Medizin 2004, 274-278, 2004.

Found on Publication Page
32

Tools for augmented-reality-based liver resection planning. B Reitinger, A Bornik, R Beichel, G Werkgartner, E Sorantin Medical Imaging 2004, 88-99, 2004.

Found on Publication Page
31

Liver segment approximation in CT data for surgical resection planning. R Beichel, T Pock, C Janko, RB Zotter, B Reitinger, A Bornik, K Palagyi, ... Proceedings of SPIE 5370, 1435-1446, 2004.

Found on Publication Page
30

Augmented-reality-based segmentation refinement. A Bornik, B Reitinger, R Beichel, E Sorantin, G Werkgartner Medical Imaging 2004, 77-87, 2004.

Found on Publication Page
29

Augmented-reality-based liver-surgical planning system. G Werkgartner, M Lemmerer, H Hauser, E Sorantin, R Beichel, ... European Surgery 36 (5), 270-274, 2004.

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In 2003
28

Fast 3D mean shift filter for CT images. GF Domnguez, H Bischof, R Beichel Scandinavian Conference on Image Analysis, 438-445, 2003.

Found on Publication Page
27

Computer-aided liver surgery planning: an augmented reality approach. A Bornik, R Beichel, B Reitinger, G Gotschuli, E Sorantin, FW Leberl, ... Medical Imaging 2003, 395-406, 2003.

Found on Publication Page
26

Fast 3D Mean Shift Filter applied to CT Images. GF Domnguez, H Bischof, R Beichel, F Leberl Medical Image Understanding and Analysis 2003, 165, 2003.

Found on Publication Page
25

EG2003 medical prize competition: augmented reality based liver surgery planning. A Bornik, R Beichel, B Reitinger, E Sorantin, G Werkgartner, F Leberl, ... Computer Graphics Forum 22 (4), 795-796, 2003.

Found on Publication Page
24

Computer aided liver surgery planning based on augmented reality techniques. A Bornik, R Beichel, B Reitinger, G Gotschuli, E Sorantin, F Leberl, ... Bildverarbeitung fr die Medizin 2003, 249-253, 2003.

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23

Nonlinear filters on 3D CT imaging-bilateral filter and mean shift filter. G Fernandez, H Bischof, R Beichel Proc. CVWW 3, 21-26, 2003.

Found on Publication Page
22

Efficient volume measurement using voxelization. B Reitinger, A Bornik, R Beichel Proceedings of the 19th spring conference on Computer graphics, 47-54, 2003.

Found on Publication Page
In 2002
21

Diaphragm dome surface segmentation in CT data sets: a 3D active appearance model approach [4684-50]. R Beichel, G Gotschuli, E Sorantin, FW Leberl, M Sonka PROCEEDINGS-SPIE THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING, 475-484, 2002.

Found on Publication Page
20

Diaphragm dome surface segmentation in CT data sets: A 3D active appearance model approach. R Beichel, G Gotschuli, E Sorantin, FW Leberl, M Sonka Medical Imaging 2002, 475-484, 2002.

Found on Publication Page
19

A new wavelet denoising method based on MDL. G Fernndez, R Beichel, H Bischof, F Leberl na, 2002.

Found on Publication Page
In 2001
18

Shape-and appearance-based segmentation of volumetric medical images. R Beichel, SC Mitchell, E Sorantin, F Leberl, AA Goshtasby, M Sonka ICIP (2), 589-592, 2001.

Found on Publication Page
In 2000
17

Adaptive Multiresolutional Algorithm for High-precision Forest. GS Ruppert, A Wimmer, R Beichel, M Ziegler Laser Radar Technology and Applications 5, 97, 2000.

Found on Publication Page
16

Fuzzy logic approach for the quantitative assessment of camouflage effectiveness in the thermal infrared domain. R Beichel, GS Ruppert, FM Gretzmacher AeroSense 2000, 378-385, 2000.

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15

Robust measure for camouflage effectiveness in the visual domain. GS Ruppert, R Beichel, FM Gretzmacher AeroSense 2000, 386-393, 2000.

Found on Publication Page
14

Adaptive multiresolutional algorithm for high-precision forest floor DTM generation. GS Ruppert, A Wimmer, R Beichel, M Ziegler AeroSense 2000, 97-105, 2000.

Found on Publication Page
In 1999
13

Fuzzy clustering of a landsat TM scene. R Beichel, R Bolter, A Pinz Geoscience and Remote Sensing Symposium, 1999. IGARSS'99 Proceedings. IEEE ..., 1999.

Found on Publication Page
In 1959
12

Ventilation And Perfusion Are Well Matched Within Anatomical Units Of Rat Lungs. M Krueger, W Lamm, C Bauer, J Hofmanninger, R Beichel, RW Glenny Am J Respir Crit Care Med 187, 2013, 1959.

Found on Publication Page
Unspecified
11

A new wavelet denoising method based on MDL, Vision with non-traditional sensors. G Fernandez, R Beichel, H Bischof, F Leberl Proc. of 26th Workshop of the Austrian Association for Pattern Recognition ..., 0.

Found on Publication Page
10

Model-Based Segmentation of Pathological Lungs in Volumetric CT Data. R Beichel .

Found on Publication Page
9

RIDER (Reference Database to Evaluate Response) Committee Combined Report, 9/25/2008 Sponsored by NIH, NCI, CIP, ITDB Causes of and Methods for Estimating/Ameliorating Variance in the Evaluation of Tumor Change in Response to Therapy. S Armato, R Beichel, L Bidaut, L Clarke, B Croft, C Fenimore, ... .

Found on Publication Page
8

Integrated Surgical Workflow for Augmented Reality Applications. D Kalkofen, B Reitinger, P Risholm, A Bornik, R Beichel, D Schmalstieg, ... .

Found on Publication Page
7

Towards Automated Detection of Abnormalities in Lung Segmentations. R Beichel, S Schlosser, P Elbischger, S Sun, G McLennan .

Found on Publication Page
6

Department of Electrical and Computer Engineering. J Jun, ML Sichitiu North Carolina State University, Raleigh, NC, 27695-7911, 0.

Found on Publication Page
5

Comparison of Mean Shift Filters for CT Images1. GF Dominguez, H Bischof, R Beichel, F Leberl .

Found on Publication Page
4

Vessel Tree Structure Inspection Based on Massive Volume Rendering. H Dou, C Bauer, RRBC Wyman .

Found on Publication Page
3

ICPR 2008 Program Committee. F Ababsa, AE Abdel-Hakim, K Abe, B Abidi, S Ablameyko, S Adam, ... .

Found on Publication Page
2

4 CSE Dept., Wright State University, Dayton OH, USA. R Beichel, S Mitchell, E Sorantin, E Leberl, A Goshtasby, M Sonka .

Found on Publication Page
1

Three Dimensional Data-Driven Multi Scale Atomic Representation of Optical Coherence Tomography. C Bauer, M Eberlein, RR Beichel, RM Ferguson, AP Khandhar, SJ Kemp, ... .

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